Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AL513477.1-201ENST00000602865 2407 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 MST1L-201ENST00000442552 2185 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 FOXO1B-201ENST00000504678 1527 ntBASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 AC007967.4-201ENST00000614700 386 ntBASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC33Q8N5R6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AP002414.2-201ENST00000591780 3365 ntBASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 AC022144.1-201ENST00000602255 1580 ntBASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 U82695.1-201ENST00000635752 1889 ntBASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC33Q8N5R6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms