Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15□□□□□ -0.01
ARHGEF39Q8N4T4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ARHGEF39Q8N4T4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15□□□□□ -0.01
ARHGEF39Q8N4T4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 MEIS3P1-201ENST00000495167 958 ntBASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AC093004.1-201ENST00000508850 424 ntBASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AC099568.2-201ENST00000609194 695 ntBASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.99□□□□□ -0.01
ARHGEF39Q8N4T4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 DFFBP1-201ENST00000433250 979 ntBASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AL132655.2-201ENST00000596276 594 ntBASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AL158212.4-201ENST00000624062 1286 ntBASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
ARHGEF39Q8N4T4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 LINC02199-201ENST00000506655 2702 ntBASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms