Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 POU5F1P6-201ENST00000466990 990 ntBASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 FAM86LP-201ENST00000478302 853 ntBASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 RN7SL219P-201ENST00000582872 296 ntBASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 KRT8P37-201ENST00000451609 1420 ntBASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AC093525.8-201ENST00000624099 1342 ntBASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 TOMM22P5-201ENST00000416399 439 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 FAM21FP-201ENST00000426241 1131 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 MIR4538-201ENST00000581377 78 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 DOC2GP-204ENST00000639052 2548 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 GGT3P-204ENST00000453783 1664 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 AC092171.3-201ENST00000610122 2651 ntBASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPOQ8N3V7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 MIR1908-201ENST00000410394 80 ntBASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 AC134915.1-201ENST00000426461 574 ntBASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 AC245100.3-201ENST00000441281 285 ntBASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms