Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC092933.1-201ENST00000393644 945 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC136604.1-201ENST00000418535 575 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AL355864.2-201ENST00000447420 863 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AL355994.2-201ENST00000447882 704 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 PHKG1P2-201ENST00000457537 863 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 RNA5SP412-201ENST00000516234 123 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 CLUHP6-201ENST00000580789 941 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 MIR6869-201ENST00000619434 62 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 AC134407.2-201ENST00000625089 1978 ntBASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS3Q8IXF0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AP000812.2-201ENST00000538934 718 ntBASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AC009486.1-201ENST00000569860 813 ntBASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 GPR182-203ENST00000622922 591 ntBASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS3Q8IXF0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 FAM21FP-201ENST00000426241 1131 ntBASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 AC007551.1-201ENST00000457394 519 ntBASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 AL450472.2-201ENST00000603663 1156 ntBASIC16.41■□□□□ 0.22
NPAS3Q8IXF0 AC005252.2-201ENST00000624630 1141 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms