Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCDC50Q8IVM0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 C8orf49-201ENST00000525043 1968 ntBASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AC008677.1-201ENST00000519230 1561 ntBASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 KRT19P2-202ENST00000557173 1012 ntBASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 AC073347.1-201ENST00000421633 2643 ntBASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC50Q8IVM0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 AL365330.1-201ENST00000607459 531 ntBASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC50Q8IVM0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 AC034105.1-201ENST00000563488 319 ntBASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms