Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL691432.1-201ENST00000596308 1422 ntBASIC16.65■□□□□ 0.26
RFX6Q8HWS3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.65■□□□□ 0.26
RFX6Q8HWS3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 LINC01225-203ENST00000563550 1244 ntBASIC16.65■□□□□ 0.26
RFX6Q8HWS3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX6Q8HWS3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.64■□□□□ 0.26
RFX6Q8HWS3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
RFX6Q8HWS3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MIR600HG-201ENST00000449175 5984 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MIR346-201ENST00000362234 95 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 FAM220BP-201ENST00000377689 816 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MKNK2P1-201ENST00000437526 628 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AL592309.1-201ENST00000443127 649 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 KRT8P23-201ENST00000560090 1207 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AL671883.3-201ENST00000603274 991 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.64■□□□□ 0.25
RFX6Q8HWS3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX6Q8HWS3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 HLA-H-201ENST00000383620 1096 ntBASIC16.63■□□□□ 0.25
RFX6Q8HWS3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 CEND1P1-201ENST00000451006 455 ntBASIC16.63■□□□□ 0.25
RFX6Q8HWS3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.63■□□□□ 0.25
RFX6Q8HWS3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms