Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 KRT8P35-201ENST00000483942 1338 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 FTLP1-201ENST00000449155 526 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AC245884.6-201ENST00000515672 1067 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 HSPB1P2-201ENST00000448722 546 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AL691432.1-201ENST00000596308 1422 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 CD8B2-202ENST00000417670 633 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 AC069218.1-201ENST00000435269 762 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 RNA5SP486-201ENST00000515961 83 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 RN7SL574P-201ENST00000581512 297 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VPS13CQ709C8 AL354989.2-201ENST00000435838 1540 ntBASIC13.03□□□□□ -0.32
VPS13CQ709C8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13CQ709C8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13CQ709C8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.02□□□□□ -0.32
VPS13CQ709C8 AC004899.1-201ENST00000424687 1714 ntBASIC13.02□□□□□ -0.32
VPS13CQ709C8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13CQ709C8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.02□□□□□ -0.32
VPS13CQ709C8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13CQ709C8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.02□□□□□ -0.32
VPS13CQ709C8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13CQ709C8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13CQ709C8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VPS13CQ709C8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 SLED1-202ENST00000512051 380 ntBASIC13.02□□□□□ -0.33
VPS13CQ709C8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 AC015910.1-201ENST00000579400 975 ntBASIC13.02□□□□□ -0.33
VPS13CQ709C8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13CQ709C8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VPS13CQ709C8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 HYMAI-201ENST00000635591 3347 ntBASIC13.01□□□□□ -0.33
VPS13CQ709C8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 BAATP1-201ENST00000412284 1225 ntBASIC13.01□□□□□ -0.33
VPS13CQ709C8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 CNN2P10-201ENST00000443067 918 ntBASIC13.01□□□□□ -0.33
VPS13CQ709C8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 AP003419.4-201ENST00000616071 517 ntBASIC13.01□□□□□ -0.33
VPS13CQ709C8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
VPS13CQ709C8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13CQ709C8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms