Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 POM121L10P-201ENST00000436994 1285 ntBASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 EIF4HP1-201ENST00000453115 687 ntBASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPAQ5VT25 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPAQ5VT25 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
CDC42BPAQ5VT25 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPAQ5VT25 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPAQ5VT25 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPAQ5VT25 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 AC092506.1-202ENST00000401022 528 ntBASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 FAM8A4P-201ENST00000435433 1213 ntBASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 RNF41-210ENST00000552244 716 ntTSL 3 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPAQ5VT25 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 AC104457.1-201ENST00000401024 814 ntBASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 SERPINA13P-202ENST00000478994 924 ntBASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 NCK2-206ENST00000522586 490 ntTSL 5 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 TBCB-211ENST00000589996 724 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 NDUFV2P1-201ENST00000596415 907 ntBASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 LRRC59-203ENST00000576448 1531 ntBASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 CA12-203ENST00000422263 2556 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 LSM5-207ENST00000410044 687 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPAQ5VT25 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 KRT8P19-201ENST00000551916 1455 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 MIR3619-201ENST00000579667 83 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AC138649.2-201ENST00000615886 705 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AC015967.2-201ENST00000624092 234 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AC006435.4-201ENST00000625037 234 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AL356737.1-201ENST00000634391 234 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 AC138627.1-207ENST00000641560 1006 ntBASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 TKT-202ENST00000423516 2075 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 PGR-209ENST00000617858 2816 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPAQ5VT25 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms