Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 SLED1-202ENST00000512051 380 ntBASIC16.86■□□□□ 0.29
VARS2Q5ST30 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.86■□□□□ 0.29
VARS2Q5ST30 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AL033527.5-201ENST00000641382 801 ntBASIC16.86■□□□□ 0.29
VARS2Q5ST30 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 MIR1909-201ENST00000411312 80 ntBASIC16.85■□□□□ 0.29
VARS2Q5ST30 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 AC097359.3-201ENST00000603982 1210 ntBASIC16.85■□□□□ 0.29
VARS2Q5ST30 MIR6805-201ENST00000615055 62 ntBASIC16.85■□□□□ 0.29
VARS2Q5ST30 AL162274.1-201ENST00000617191 1098 ntBASIC16.85■□□□□ 0.29
VARS2Q5ST30 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VARS2Q5ST30 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARS2Q5ST30 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 AL662844.4-201ENST00000606367 2838 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 TMEM14DP-201ENST00000422205 345 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 HSFY1P1-201ENST00000423928 1178 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 ELOCP6-201ENST00000429066 328 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 ELOCP12-201ENST00000458706 328 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 AC007688.1-201ENST00000475592 759 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 AC107308.1-201ENST00000615897 301 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 AL607033.1-201ENST00000623900 1599 ntBASIC16.84■□□□□ 0.29
VARS2Q5ST30 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VARS2Q5ST30 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms