Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 AL390955.2-201ENST00000603032 514 ntBASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 AC026120.1-201ENST00000611536 926 ntBASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 AC138649.4-201ENST00000612222 287 ntBASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CHRFAM7AQ494W8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.08□□□□□ -0.15
CHRFAM7AQ494W8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CHRFAM7AQ494W8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.08□□□□□ -0.15
CHRFAM7AQ494W8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CHRFAM7AQ494W8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CHRFAM7AQ494W8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 MIR943-201ENST00000401286 94 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 LINC00982-205ENST00000420957 435 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 AC002472.2-201ENST00000442739 958 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SPDYE11-202ENST00000450699 704 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SPDYE9P-201ENST00000570642 692 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SPDYE10P-202ENST00000612005 668 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SPDYE8P-202ENST00000612377 668 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 AC104640.1-201ENST00000562617 2109 ntBASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CHRFAM7AQ494W8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 AC010491.1-201ENST00000563101 2797 ntBASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 GAPDHP21-201ENST00000450301 1010 ntBASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 DBET-201ENST00000630918 3363 ntBASIC14.07□□□□□ -0.16
CHRFAM7AQ494W8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms