Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 FO681548.1-201ENST00000455617 1132 ntBASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AL391069.4-201ENST00000609583 481 ntBASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AC092850.2-201ENST00000623821 2697 ntBASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 BRWD1P1-201ENST00000401091 371 ntBASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 ACTG1P3-201ENST00000431775 1114 ntBASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 RN7SL399P-201ENST00000471648 279 ntBASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTC1Q2NKJ3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 FO393414.2-201ENST00000405153 598 ntBASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 HIST3H2BA-201ENST00000436555 524 ntBASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 AC108725.1-201ENST00000495472 409 ntBASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 MIR5189-201ENST00000577370 114 ntBASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTC1Q2NKJ3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms