Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 CRYGEP-201ENST00000412192 528 ntBASIC14.21□□□□□ -0.13
ODF4Q2M2E3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 AP002469.2-201ENST00000531724 424 ntBASIC14.21□□□□□ -0.13
ODF4Q2M2E3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
ODF4Q2M2E3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 AC008677.1-201ENST00000519230 1561 ntBASIC14.21□□□□□ -0.14
ODF4Q2M2E3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF4Q2M2E3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 PRSS29P-201ENST00000440800 595 ntBASIC14.2□□□□□ -0.14
ODF4Q2M2E3 VN2R19P-201ENST00000442399 1052 ntBASIC14.2□□□□□ -0.14
ODF4Q2M2E3 AC093724.1-201ENST00000448659 1027 ntBASIC14.2□□□□□ -0.14
ODF4Q2M2E3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 MIR7706-201ENST00000613747 67 ntBASIC14.2□□□□□ -0.14
ODF4Q2M2E3 AL691432.3-201ENST00000621860 400 ntBASIC14.2□□□□□ -0.14
ODF4Q2M2E3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF4Q2M2E3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms