Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 PCDHB19P-201ENST00000570871 2371 ntBASIC18.94■□□□□ 0.62
PDS5AQ29RF7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AL512343.1-201ENST00000605837 169 ntBASIC18.94■□□□□ 0.62
PDS5AQ29RF7 MIR6805-201ENST00000615055 62 ntBASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AC005252.2-201ENST00000624630 1141 ntBASIC18.94■□□□□ 0.62
PDS5AQ29RF7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDS5AQ29RF7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AC005229.1-201ENST00000392885 409 ntBASIC18.93■□□□□ 0.62
PDS5AQ29RF7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AC009486.1-201ENST00000569860 813 ntBASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 AC107373.2-201ENST00000607735 490 ntBASIC18.93■□□□□ 0.62
PDS5AQ29RF7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.93■□□□□ 0.62
PDS5AQ29RF7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDS5AQ29RF7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms