Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 BCRP7-201ENST00000511549 544 ntBASIC13.73□□□□□ -0.21
ABCA4P78363 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.73□□□□□ -0.21
ABCA4P78363 PTP4A1P2-201ENST00000546033 454 ntBASIC13.73□□□□□ -0.21
ABCA4P78363 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCA4P78363 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.73□□□□□ -0.21
ABCA4P78363 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.73□□□□□ -0.21
ABCA4P78363 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCA4P78363 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCA4P78363 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ABCA4P78363 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ABCA4P78363 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCA4P78363 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ABCA4P78363 AC005229.1-201ENST00000392885 409 ntBASIC13.72□□□□□ -0.21
ABCA4P78363 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 AL442647.2-201ENST00000429864 857 ntBASIC13.72□□□□□ -0.21
ABCA4P78363 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCA4P78363 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCA4P78363 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCA4P78363 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCA4P78363 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCA4P78363 AL691432.1-201ENST00000596308 1422 ntBASIC13.72□□□□□ -0.21
ABCA4P78363 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
ABCA4P78363 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
ABCA4P78363 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCA4P78363 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ABCA4P78363 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 FAM21FP-201ENST00000426241 1131 ntBASIC13.71□□□□□ -0.21
ABCA4P78363 KRT43P-201ENST00000434019 910 ntBASIC13.71□□□□□ -0.21
ABCA4P78363 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 RNA5SP423-201ENST00000517127 109 ntBASIC13.71□□□□□ -0.21
ABCA4P78363 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.71□□□□□ -0.21
ABCA4P78363 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ABCA4P78363 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ABCA4P78363 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.71□□□□□ -0.21
ABCA4P78363 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ABCA4P78363 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ABCA4P78363 AC092506.1-202ENST00000401022 528 ntBASIC13.71□□□□□ -0.21
ABCA4P78363 RNA5SP412-201ENST00000516234 123 ntBASIC13.71□□□□□ -0.21
ABCA4P78363 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.71□□□□□ -0.22
ABCA4P78363 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ABCA4P78363 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ABCA4P78363 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ABCA4P78363 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ABCA4P78363 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.71□□□□□ -0.22
ABCA4P78363 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ABCA4P78363 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.71□□□□□ -0.22
ABCA4P78363 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.71□□□□□ -0.22
ABCA4P78363 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ABCA4P78363 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA4P78363 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms