Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC092384.3-202ENST00000564646 2873 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC018892.3-201ENST00000623986 2499 ntBASIC13.96□□□□□ -0.17
HIST1H3AP68431 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC254562.1-201ENST00000417586 456 ntBASIC13.96□□□□□ -0.17
HIST1H3AP68431 RBPMS2P1-201ENST00000437762 623 ntBASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC026150.2-201ENST00000564693 1156 ntBASIC13.96□□□□□ -0.17
HIST1H3AP68431 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC007967.4-201ENST00000614700 386 ntBASIC13.96□□□□□ -0.17
HIST1H3AP68431 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H3AP68431 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H3AP68431 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HIST1H3AP68431 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HIST1H3AP68431 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.96□□□□□ -0.18
HIST1H3AP68431 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H3AP68431 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
HIST1H3AP68431 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HIST1H3AP68431 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 PRAL-201ENST00000624952 3286 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC023141.5-201ENST00000458585 616 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AL512356.2-201ENST00000546955 174 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC104640.1-201ENST00000562617 2109 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC097359.3-201ENST00000603982 1210 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 AP001059.3-201ENST00000619053 235 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC105250.1-201ENST00000509378 2057 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 AC126177.1-201ENST00000547829 2218 ntBASIC13.95□□□□□ -0.18
HIST1H3AP68431 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H3AP68431 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H3AP68431 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms