Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SPCS3P61009 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 MRPL20P1-201ENST00000400819 433 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 PMS2P4-201ENST00000412466 1052 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS3P61009 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS3P61009 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS3P61009 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS3P61009 PCDHA3-202ENST00000532566 4594 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS3P61009 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 AP002414.2-201ENST00000591780 3365 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.09□□□□□ -0.31
SPCS3P61009 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
SPCS3P61009 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS3P61009 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 PPT1-215ENST00000641471 2368 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SPCS3P61009 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS3P61009 AC106881.1-201ENST00000605849 3329 ntBASIC13.09□□□□□ -0.31
SPCS3P61009 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS3P61009 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS3P61009 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS3P61009 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.08□□□□□ -0.31
SPCS3P61009 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
SPCS3P61009 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS3P61009 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS3P61009 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.08□□□□□ -0.31
SPCS3P61009 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS3P61009 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS3P61009 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 AC020658.6-201ENST00000623564 1870 ntBASIC13.08□□□□□ -0.32
SPCS3P61009 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 TMBIM7P-203ENST00000641617 1718 ntBASIC13.08□□□□□ -0.32
SPCS3P61009 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 RNU1-129P-201ENST00000384064 167 ntBASIC13.08□□□□□ -0.32
SPCS3P61009 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.08□□□□□ -0.32
SPCS3P61009 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.08□□□□□ -0.32
SPCS3P61009 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 U1.21-201ENST00000580816 167 ntBASIC13.08□□□□□ -0.32
SPCS3P61009 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
SPCS3P61009 AL031055.1-201ENST00000606362 631 ntBASIC13.08□□□□□ -0.32
SPCS3P61009 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS3P61009 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS3P61009 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS3P61009 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SPCS3P61009 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SPCS3P61009 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SPCS3P61009 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 AL139385.1-201ENST00000611744 3272 ntBASIC13.07□□□□□ -0.32
SPCS3P61009 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS3P61009 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms