Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.25□□□□□ -0.13
GFRA1P56159 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.25□□□□□ -0.13
GFRA1P56159 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 AP005018.1-201ENST00000525475 301 ntBASIC14.25□□□□□ -0.13
GFRA1P56159 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 RARRES2P5-201ENST00000564013 466 ntBASIC14.25□□□□□ -0.13
GFRA1P56159 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 CHCHD2P3-201ENST00000603038 451 ntBASIC14.25□□□□□ -0.13
GFRA1P56159 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.25□□□□□ -0.13
GFRA1P56159 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GFRA1P56159 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.25□□□□□ -0.13
GFRA1P56159 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GFRA1P56159 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.24□□□□□ -0.13
GFRA1P56159 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 KRT18P64-201ENST00000434946 1219 ntBASIC14.24□□□□□ -0.13
GFRA1P56159 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.24□□□□□ -0.13
GFRA1P56159 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.24□□□□□ -0.13
GFRA1P56159 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.24□□□□□ -0.13
GFRA1P56159 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.24□□□□□ -0.13
GFRA1P56159 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.24□□□□□ -0.13
GFRA1P56159 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
GFRA1P56159 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 MIR4313-201ENST00000580760 101 ntBASIC14.24□□□□□ -0.13
GFRA1P56159 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.24□□□□□ -0.13
GFRA1P56159 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
GFRA1P56159 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GFRA1P56159 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 AL513523.2-202ENST00000427283 2040 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms