Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.19■□□□□ 0.02
GFERP55789 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.19■□□□□ 0.02
GFERP55789 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.19■□□□□ 0.02
GFERP55789 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.19■□□□□ 0.02
GFERP55789 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
GFERP55789 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.19■□□□□ 0.02
GFERP55789 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
GFERP55789 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFERP55789 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GFERP55789 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 AC018695.7-201ENST00000624587 2492 ntBASIC15.18■□□□□ 0.02
GFERP55789 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.18■□□□□ 0.02
GFERP55789 ARSEP1-201ENST00000420443 635 ntBASIC15.18■□□□□ 0.02
GFERP55789 GPR53P-205ENST00000457298 1084 ntBASIC15.18■□□□□ 0.02
GFERP55789 FAM86LP-201ENST00000478302 853 ntBASIC15.18■□□□□ 0.02
GFERP55789 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.18■□□□□ 0.02
GFERP55789 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.18■□□□□ 0.02
GFERP55789 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.18■□□□□ 0.02
GFERP55789 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.18■□□□□ 0.02
GFERP55789 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GFERP55789 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 AL033527.5-201ENST00000641382 801 ntBASIC15.18■□□□□ 0.02
GFERP55789 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
GFERP55789 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 MTHFR-217ENST00000641820 1569 ntBASIC15.18■□□□□ 0.02
GFERP55789 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.18■□□□□ 0.02
GFERP55789 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFERP55789 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.17■□□□□ 0.02
GFERP55789 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.17■□□□□ 0.02
GFERP55789 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.17■□□□□ 0.02
GFERP55789 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.17■□□□□ 0.02
GFERP55789 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
GFERP55789 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
GFERP55789 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.17■□□□□ 0.02
GFERP55789 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.17■□□□□ 0.02
GFERP55789 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
GFERP55789 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFERP55789 TOMM22P5-201ENST00000416399 439 ntBASIC15.17■□□□□ 0.02
GFERP55789 ATP5G2P4-201ENST00000442175 420 ntBASIC15.17■□□□□ 0.02
GFERP55789 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms