Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.57■□□□□ 0.4
PMS1P54277 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.57■□□□□ 0.4
PMS1P54277 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.57■□□□□ 0.4
PMS1P54277 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
PMS1P54277 KRT8P37-201ENST00000451609 1420 ntBASIC17.56■□□□□ 0.4
PMS1P54277 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.56■□□□□ 0.4
PMS1P54277 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 AC091951.1-201ENST00000512854 2465 ntBASIC17.56■□□□□ 0.4
PMS1P54277 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.56■□□□□ 0.4
PMS1P54277 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 AL139010.1-201ENST00000454878 894 ntBASIC17.56■□□□□ 0.4
PMS1P54277 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.56■□□□□ 0.4
PMS1P54277 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.56■□□□□ 0.4
PMS1P54277 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.56■□□□□ 0.4
PMS1P54277 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.56■□□□□ 0.4
PMS1P54277 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.56■□□□□ 0.4
PMS1P54277 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.56■□□□□ 0.4
PMS1P54277 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.56■□□□□ 0.4
PMS1P54277 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PMS1P54277 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PMS1P54277 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PMS1P54277 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PMS1P54277 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 C18orf15-201ENST00000623680 2534 ntBASIC17.55■□□□□ 0.4
PMS1P54277 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PMS1P54277 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PMS1P54277 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.55■□□□□ 0.4
PMS1P54277 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.55■□□□□ 0.4
PMS1P54277 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.55■□□□□ 0.4
PMS1P54277 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
PMS1P54277 AC112482.1-201ENST00000492080 688 ntBASIC17.55■□□□□ 0.4
PMS1P54277 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.55■□□□□ 0.4
PMS1P54277 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.55■□□□□ 0.4
PMS1P54277 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 AC097359.3-201ENST00000603982 1210 ntBASIC17.55■□□□□ 0.4
PMS1P54277 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.55■□□□□ 0.4
PMS1P54277 AC127383.1-201ENST00000444697 1800 ntBASIC17.55■□□□□ 0.4
PMS1P54277 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms