Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CLTCL1P53675 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC22.38■■□□□ 1.17
CLTCL1P53675 PCDHA14-201ENST00000506751 2298 ntBASIC22.38■■□□□ 1.17
CLTCL1P53675 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 AC112504.1-201ENST00000623415 1841 ntBASIC22.38■■□□□ 1.17
CLTCL1P53675 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CLTCL1P53675 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 AC024909.3-201ENST00000611513 2257 ntBASIC22.38■■□□□ 1.17
CLTCL1P53675 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 GPAA1P2-201ENST00000417923 928 ntBASIC22.38■■□□□ 1.17
CLTCL1P53675 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
CLTCL1P53675 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CLTCL1P53675 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC22.38■■□□□ 1.17
CLTCL1P53675 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC22.38■■□□□ 1.17
CLTCL1P53675 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLTCL1P53675 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CLTCL1P53675 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC22.37■■□□□ 1.17
CLTCL1P53675 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC22.37■■□□□ 1.17
CLTCL1P53675 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC22.37■■□□□ 1.17
CLTCL1P53675 PFN1P12-201ENST00000455938 534 ntBASIC22.37■■□□□ 1.17
CLTCL1P53675 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 TBCB-211ENST00000589996 724 ntTSL 3 BASIC22.37■■□□□ 1.17
CLTCL1P53675 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.37■■□□□ 1.17
CLTCL1P53675 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC22.37■■□□□ 1.17
CLTCL1P53675 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC22.37■■□□□ 1.17
CLTCL1P53675 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLTCL1P53675 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 Z93015.1-201ENST00000451718 390 ntBASIC22.36■■□□□ 1.17
CLTCL1P53675 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.36■■□□□ 1.17
CLTCL1P53675 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC22.36■■□□□ 1.17
CLTCL1P53675 AC006453.4-201ENST00000636949 1252 ntBASIC22.36■■□□□ 1.17
CLTCL1P53675 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC22.36■■□□□ 1.17
CLTCL1P53675 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 BLK-205ENST00000529894 2017 ntTSL 5 BASIC22.36■■□□□ 1.17
CLTCL1P53675 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
CLTCL1P53675 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC22.36■■□□□ 1.17
CLTCL1P53675 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLTCL1P53675 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC22.35■■□□□ 1.17
CLTCL1P53675 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC22.35■■□□□ 1.17
CLTCL1P53675 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC22.35■■□□□ 1.17
CLTCL1P53675 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC22.35■■□□□ 1.17
CLTCL1P53675 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC22.35■■□□□ 1.17
CLTCL1P53675 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CLTCL1P53675 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC22.35■■□□□ 1.17
CLTCL1P53675 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLTCL1P53675 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC22.35■■□□□ 1.17
CLTCL1P53675 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC22.35■■□□□ 1.17
CLTCL1P53675 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC22.35■■□□□ 1.17
CLTCL1P53675 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.35■■□□□ 1.17
CLTCL1P53675 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC22.35■■□□□ 1.17
CLTCL1P53675 EEF1DP1-201ENST00000585891 896 ntBASIC22.35■■□□□ 1.17
CLTCL1P53675 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC22.35■■□□□ 1.17
CLTCL1P53675 KC6-205ENST00000599934 556 ntTSL 4 BASIC22.35■■□□□ 1.17
CLTCL1P53675 PRSS30P-206ENST00000641773 873 ntBASIC22.35■■□□□ 1.17
CLTCL1P53675 KRT8P14-201ENST00000414254 1442 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms