Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
EFNA3P52797 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.92□□□□□ -0.02
EFNA3P52797 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 RPL13P2-201ENST00000440687 659 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.92□□□□□ -0.02
EFNA3P52797 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.92□□□□□ -0.02
EFNA3P52797 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 AC092337.1-201ENST00000568699 1129 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 AC004233.3-201ENST00000607794 1269 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.92□□□□□ -0.02
EFNA3P52797 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
EFNA3P52797 AC007541.1-201ENST00000570282 1469 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 AC024909.3-201ENST00000611513 2257 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 CYP2T1P-202ENST00000641596 2535 ntBASIC14.92□□□□□ -0.02
EFNA3P52797 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.92□□□□□ -0.02
EFNA3P52797 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
EFNA3P52797 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EFNA3P52797 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.91□□□□□ -0.02
EFNA3P52797 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.91□□□□□ -0.02
EFNA3P52797 WASH4P-201ENST00000564273 1246 ntBASIC14.91□□□□□ -0.02
EFNA3P52797 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.91□□□□□ -0.02
EFNA3P52797 AL391069.4-201ENST00000609583 481 ntBASIC14.91□□□□□ -0.02
EFNA3P52797 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EFNA3P52797 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 CDC14C-201ENST00000428251 1719 ntBASIC14.91□□□□□ -0.02
EFNA3P52797 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNA3P52797 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNA3P52797 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.91□□□□□ -0.02
EFNA3P52797 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
EFNA3P52797 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 AC010491.1-201ENST00000563101 2797 ntBASIC14.9□□□□□ -0.02
EFNA3P52797 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.9□□□□□ -0.02
EFNA3P52797 AL603832.2-201ENST00000566195 2125 ntBASIC14.9□□□□□ -0.02
EFNA3P52797 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNA3P52797 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNA3P52797 AC124067.4-201ENST00000519691 2379 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms