Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX2P50458 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.2□□□□□ -0.14
LHX2P50458 TOMM22P5-201ENST00000416399 439 ntBASIC14.2□□□□□ -0.14
LHX2P50458 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX2P50458 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX2P50458 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX2P50458 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.2□□□□□ -0.14
LHX2P50458 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.2□□□□□ -0.14
LHX2P50458 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 AL596325.1-201ENST00000563991 1082 ntBASIC14.2□□□□□ -0.14
LHX2P50458 RRP7BP-205ENST00000566851 833 ntBASIC14.2□□□□□ -0.14
LHX2P50458 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.2□□□□□ -0.14
LHX2P50458 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 AC007431.3-201ENST00000623221 587 ntBASIC14.2□□□□□ -0.14
LHX2P50458 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX2P50458 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LHX2P50458 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.2□□□□□ -0.14
LHX2P50458 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.2□□□□□ -0.14
LHX2P50458 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX2P50458 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX2P50458 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 RN7SL692P-201ENST00000464677 288 ntBASIC14.19□□□□□ -0.14
LHX2P50458 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX2P50458 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.19□□□□□ -0.14
LHX2P50458 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.19□□□□□ -0.14
LHX2P50458 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 AC008494.3-201ENST00000606615 944 ntBASIC14.19□□□□□ -0.14
LHX2P50458 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.19□□□□□ -0.14
LHX2P50458 AC093726.1-201ENST00000608064 963 ntBASIC14.19□□□□□ -0.14
LHX2P50458 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.19□□□□□ -0.14
LHX2P50458 AL158212.4-201ENST00000624062 1286 ntBASIC14.19□□□□□ -0.14
LHX2P50458 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LHX2P50458 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LHX2P50458 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.19□□□□□ -0.14
LHX2P50458 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LHX2P50458 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LHX2P50458 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LHX2P50458 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX2P50458 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
LHX2P50458 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX2P50458 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX2P50458 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX2P50458 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX2P50458 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX2P50458 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms