Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 PMS2P4-201ENST00000412466 1052 ntBASIC14.13□□□□□ -0.15
SOX2P48431 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 AC093724.1-201ENST00000448659 1027 ntBASIC14.13□□□□□ -0.15
SOX2P48431 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.13□□□□□ -0.15
SOX2P48431 CXCL1P1-201ENST00000502804 216 ntBASIC14.13□□□□□ -0.15
SOX2P48431 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 AP002469.2-201ENST00000531724 424 ntBASIC14.13□□□□□ -0.15
SOX2P48431 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.13□□□□□ -0.15
SOX2P48431 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.13□□□□□ -0.15
SOX2P48431 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.13□□□□□ -0.15
SOX2P48431 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SOX2P48431 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.13□□□□□ -0.15
SOX2P48431 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SOX2P48431 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SOX2P48431 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.12□□□□□ -0.15
SOX2P48431 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.12□□□□□ -0.15
SOX2P48431 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 AC012640.2-201ENST00000561606 901 ntBASIC14.12□□□□□ -0.15
SOX2P48431 AL031432.2-201ENST00000566714 459 ntBASIC14.12□□□□□ -0.15
SOX2P48431 AL928711.1-201ENST00000570165 459 ntBASIC14.12□□□□□ -0.15
SOX2P48431 MIR4751-201ENST00000578027 74 ntBASIC14.12□□□□□ -0.15
SOX2P48431 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.12□□□□□ -0.15
SOX2P48431 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.12□□□□□ -0.15
SOX2P48431 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SOX2P48431 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SOX2P48431 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SOX2P48431 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SOX2P48431 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms