Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MTHFRP42898 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MTHFRP42898 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MTHFRP42898 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MTHFRP42898 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MTHFRP42898 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MTHFRP42898 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MTHFRP42898 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 AGGF1P2-201ENST00000426656 2106 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 PCDHA14-201ENST00000506751 2298 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 YBX1P6-201ENST00000442962 1002 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
MTHFRP42898 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.66■□□□□ 0.26
MTHFRP42898 AC007551.1-201ENST00000457394 519 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 AC099548.2-209ENST00000480264 625 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 AC108725.1-201ENST00000495472 409 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.66■□□□□ 0.26
MTHFRP42898 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.66■□□□□ 0.26
MTHFRP42898 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.66■□□□□ 0.26
MTHFRP42898 AC009486.1-201ENST00000569860 813 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.66■□□□□ 0.26
MTHFRP42898 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MTHFRP42898 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.66■□□□□ 0.26
MTHFRP42898 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 AC105020.1-201ENST00000435356 2205 ntBASIC16.66■□□□□ 0.26
MTHFRP42898 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MTHFRP42898 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MTHFRP42898 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MTHFRP42898 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.65■□□□□ 0.26
MTHFRP42898 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.65■□□□□ 0.26
MTHFRP42898 EEF1DP4-201ENST00000446006 880 ntBASIC16.65■□□□□ 0.26
MTHFRP42898 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MTHFRP42898 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MTHFRP42898 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 AL139384.1-201ENST00000612143 3047 ntBASIC16.65■□□□□ 0.26
MTHFRP42898 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.65■□□□□ 0.26
MTHFRP42898 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFRP42898 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFRP42898 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MTHFRP42898 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.64■□□□□ 0.26
MTHFRP42898 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MTHFRP42898 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 AL691432.1-201ENST00000596308 1422 ntBASIC16.64■□□□□ 0.25
MTHFRP42898 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 INTS4P2-202ENST00000614726 2019 ntBASIC16.64■□□□□ 0.25
MTHFRP42898 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
MTHFRP42898 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 AZGP1P1-201ENST00000411909 902 ntBASIC16.64■□□□□ 0.25
MTHFRP42898 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.64■□□□□ 0.25
MTHFRP42898 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.64■□□□□ 0.25
MTHFRP42898 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.64■□□□□ 0.25
MTHFRP42898 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC243562.2-201ENST00000561247 970 ntBASIC16.64■□□□□ 0.25
MTHFRP42898 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.64■□□□□ 0.25
MTHFRP42898 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC010328.2-201ENST00000597698 1111 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms