Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL109936.8-201ENST00000641772 604 ntBASIC14.67□□□□□ -0.06
RFC3P40938 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFC3P40938 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 REXO1L8P-201ENST00000604378 1897 ntBASIC14.66□□□□□ -0.06
RFC3P40938 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFC3P40938 SPDYE19P-201ENST00000338590 713 ntBASIC14.66□□□□□ -0.06
RFC3P40938 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.66□□□□□ -0.06
RFC3P40938 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RFC3P40938 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 RN7SL692P-201ENST00000464677 288 ntBASIC14.66□□□□□ -0.06
RFC3P40938 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.66□□□□□ -0.06
RFC3P40938 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 SPDYE22P-201ENST00000582158 798 ntBASIC14.66□□□□□ -0.06
RFC3P40938 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 MIR4321-201ENST00000592276 80 ntBASIC14.66□□□□□ -0.06
RFC3P40938 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.66□□□□□ -0.06
RFC3P40938 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.66□□□□□ -0.06
RFC3P40938 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFC3P40938 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
RFC3P40938 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFC3P40938 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.65□□□□□ -0.06
RFC3P40938 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 CYP4F24P-201ENST00000586049 1580 ntBASIC14.65□□□□□ -0.06
RFC3P40938 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFC3P40938 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.65□□□□□ -0.06
RFC3P40938 AC027307.3-201ENST00000594262 1100 ntBASIC14.65□□□□□ -0.06
RFC3P40938 AL365330.1-201ENST00000607459 531 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms