Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCLP35914 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCLP35914 AC005498.2-205ENST00000593218 784 ntBASIC15.86■□□□□ 0.13
HMGCLP35914 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.86■□□□□ 0.13
HMGCLP35914 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 AL390754.1-201ENST00000619088 582 ntBASIC15.86■□□□□ 0.13
HMGCLP35914 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGCLP35914 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 BASP1P1-201ENST00000430708 665 ntBASIC15.85■□□□□ 0.13
HMGCLP35914 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGCLP35914 TARDBPP1-201ENST00000442013 1203 ntBASIC15.85■□□□□ 0.13
HMGCLP35914 AC009477.1-201ENST00000452936 217 ntBASIC15.85■□□□□ 0.13
HMGCLP35914 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGCLP35914 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCLP35914 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCLP35914 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCLP35914 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 AL607033.1-201ENST00000623900 1599 ntBASIC15.84■□□□□ 0.13
HMGCLP35914 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.84■□□□□ 0.13
HMGCLP35914 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 AC004890.2-204ENST00000481968 304 ntBASIC15.84■□□□□ 0.13
HMGCLP35914 SDHAP3-202ENST00000515467 728 ntBASIC15.84■□□□□ 0.13
HMGCLP35914 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.84■□□□□ 0.13
HMGCLP35914 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.84■□□□□ 0.13
HMGCLP35914 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCLP35914 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms