Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 AC016027.1-202ENST00000607927 1699 ntBASIC15.28■□□□□ 0.04
KRT20P35900 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT20P35900 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT20P35900 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT20P35900 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT20P35900 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT20P35900 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 AL671277.1-201ENST00000429656 993 ntBASIC15.27■□□□□ 0.04
KRT20P35900 HTR5BP-201ENST00000430851 1154 ntBASIC15.27■□□□□ 0.04
KRT20P35900 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT20P35900 RN7SL589P-201ENST00000481268 310 ntBASIC15.27■□□□□ 0.04
KRT20P35900 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT20P35900 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT20P35900 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT20P35900 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT20P35900 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
KRT20P35900 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRT20P35900 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.27■□□□□ 0.04
KRT20P35900 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.27■□□□□ 0.03
KRT20P35900 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.27■□□□□ 0.03
KRT20P35900 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRT20P35900 AP002414.2-201ENST00000591780 3365 ntBASIC15.27■□□□□ 0.03
KRT20P35900 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT20P35900 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
KRT20P35900 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT20P35900 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.26■□□□□ 0.03
KRT20P35900 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT20P35900 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.26■□□□□ 0.03
KRT20P35900 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms