Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC6A4P31645 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLC6A4P31645 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A4P31645 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A4P31645 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC6A4P31645 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC6A4P31645 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 TP53TG3HP-202ENST00000569755 579 ntBASIC16.32■□□□□ 0.2
SLC6A4P31645 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 AC026691.1-201ENST00000602502 2017 ntBASIC16.32■□□□□ 0.2
SLC6A4P31645 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A4P31645 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A4P31645 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
SLC6A4P31645 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A4P31645 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A4P31645 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 AL513523.2-202ENST00000427283 2040 ntBASIC16.31■□□□□ 0.2
SLC6A4P31645 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC6A4P31645 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC6A4P31645 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
SLC6A4P31645 WASH4P-201ENST00000564273 1246 ntBASIC16.31■□□□□ 0.2
SLC6A4P31645 AC140912.1-201ENST00000577171 1054 ntBASIC16.31■□□□□ 0.2
SLC6A4P31645 AL391069.4-201ENST00000609583 481 ntBASIC16.31■□□□□ 0.2
SLC6A4P31645 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A4P31645 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A4P31645 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A4P31645 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms