Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HOXC12P31275 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC12P31275 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC12P31275 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 MYO15B-237ENST00000642007 4893 ntBASIC14.21□□□□□ -0.13
HOXC12P31275 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC12P31275 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HOXC12P31275 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC12P31275 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC12P31275 AC027369.6-201ENST00000525520 931 ntBASIC14.21□□□□□ -0.13
HOXC12P31275 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC12P31275 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 MIR4321-201ENST00000592276 80 ntBASIC14.21□□□□□ -0.13
HOXC12P31275 AC004233.3-201ENST00000607794 1269 ntBASIC14.21□□□□□ -0.13
HOXC12P31275 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC12P31275 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC12P31275 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXC12P31275 AC100757.3-201ENST00000622361 1406 ntBASIC14.21□□□□□ -0.13
HOXC12P31275 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 PCDHA14-201ENST00000506751 2298 ntBASIC14.21□□□□□ -0.14
HOXC12P31275 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HOXC12P31275 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.21□□□□□ -0.14
HOXC12P31275 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.21□□□□□ -0.14
HOXC12P31275 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.21□□□□□ -0.14
HOXC12P31275 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HOXC12P31275 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC12P31275 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 CETN4P-206ENST00000642099 2168 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 TSSK5P-201ENST00000423978 907 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 AC245100.5-201ENST00000452108 331 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 AL139010.1-201ENST00000454878 894 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 AC005052.1-201ENST00000625181 2492 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HOXC12P31275 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 AL592424.1-201ENST00000563624 1536 ntBASIC14.2□□□□□ -0.14
HOXC12P31275 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC12P31275 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HOXC12P31275 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC12P31275 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms