Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.52■□□□□ 0.72
TM4SF1P30408 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.52■□□□□ 0.72
TM4SF1P30408 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 RN7SL48P-201ENST00000579283 293 ntBASIC19.52■□□□□ 0.72
TM4SF1P30408 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 AC097724.1-201ENST00000609581 426 ntBASIC19.52■□□□□ 0.72
TM4SF1P30408 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.52■□□□□ 0.72
TM4SF1P30408 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF1P30408 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.51■□□□□ 0.71
TM4SF1P30408 AGGF1P2-201ENST00000426656 2106 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TM4SF1P30408 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TM4SF1P30408 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 KLF2P2-201ENST00000416807 1039 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 NUS1P3-201ENST00000423502 862 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 AC114812.1-204ENST00000449669 728 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TM4SF1P30408 MIR4706-201ENST00000582134 82 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TM4SF1P30408 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TM4SF1P30408 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TM4SF1P30408 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TM4SF1P30408 AC080080.1-201ENST00000625121 2420 ntBASIC19.51■□□□□ 0.71
TM4SF1P30408 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TM4SF1P30408 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.51■□□□□ 0.71
TM4SF1P30408 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF1P30408 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.5■□□□□ 0.71
TM4SF1P30408 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
TM4SF1P30408 HINT2P1-201ENST00000419438 481 ntBASIC19.5■□□□□ 0.71
TM4SF1P30408 AC016700.1-201ENST00000429424 312 ntBASIC19.5■□□□□ 0.71
TM4SF1P30408 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF1P30408 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TM4SF1P30408 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF1P30408 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF1P30408 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 AL023775.1-201ENST00000454907 1746 ntBASIC19.5■□□□□ 0.71
TM4SF1P30408 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF1P30408 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF1P30408 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF1P30408 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 RNU1-114P-201ENST00000365297 166 ntBASIC19.49■□□□□ 0.71
TM4SF1P30408 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TM4SF1P30408 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.49■□□□□ 0.71
TM4SF1P30408 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.49■□□□□ 0.71
TM4SF1P30408 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.49■□□□□ 0.71
TM4SF1P30408 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.49■□□□□ 0.71
TM4SF1P30408 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.49■□□□□ 0.71
TM4SF1P30408 NDUFV2P1-201ENST00000596415 907 ntBASIC19.49■□□□□ 0.71
TM4SF1P30408 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 MIR6727-201ENST00000620702 65 ntBASIC19.49■□□□□ 0.71
TM4SF1P30408 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.49■□□□□ 0.71
TM4SF1P30408 PRSS30P-206ENST00000641773 873 ntBASIC19.49■□□□□ 0.71
TM4SF1P30408 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms