Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 AC092850.2-201ENST00000623821 2697 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC026150.2-201ENST00000564693 1156 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC027612.4-201ENST00000605371 583 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC018529.1-201ENST00000613063 361 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC023511.2-201ENST00000618803 211 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 CYP4F24P-201ENST00000586049 1580 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.34□□□□□ -0.11
HLA-DOBP13765 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DOBP13765 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DOBP13765 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DOBP13765 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.33□□□□□ -0.11
HLA-DOBP13765 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DOBP13765 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HLA-DOBP13765 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.33□□□□□ -0.11
HLA-DOBP13765 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DOBP13765 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 DNAJB3-202ENST00000449667 1266 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 AL139010.1-201ENST00000454878 894 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 BANF1P1-201ENST00000553684 263 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 SNHG9-202ENST00000564014 471 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 AC003101.2-201ENST00000612557 442 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DOBP13765 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DOBP13765 REXO1L1P-202ENST00000608646 1974 ntBASIC14.33□□□□□ -0.12
HLA-DOBP13765 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms