Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 AC006449.5-201ENST00000610658 2098 ntBASIC18.31■□□□□ 0.52
BMP3P12645 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP3P12645 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.31■□□□□ 0.52
BMP3P12645 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 GPR53P-205ENST00000457298 1084 ntBASIC18.31■□□□□ 0.52
BMP3P12645 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.31■□□□□ 0.52
BMP3P12645 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.31■□□□□ 0.52
BMP3P12645 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP3P12645 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 BRI3BPP1-201ENST00000594224 787 ntBASIC18.31■□□□□ 0.52
BMP3P12645 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.31■□□□□ 0.52
BMP3P12645 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BMP3P12645 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP3P12645 AC069224.1-201ENST00000566372 1715 ntBASIC18.31■□□□□ 0.52
BMP3P12645 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BMP3P12645 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BMP3P12645 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.31■□□□□ 0.52
BMP3P12645 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
BMP3P12645 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.3■□□□□ 0.52
BMP3P12645 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.3■□□□□ 0.52
BMP3P12645 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 AC007389.4-201ENST00000454674 793 ntBASIC18.3■□□□□ 0.52
BMP3P12645 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.3■□□□□ 0.52
BMP3P12645 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.3■□□□□ 0.52
BMP3P12645 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 AL162274.1-201ENST00000617191 1098 ntBASIC18.3■□□□□ 0.52
BMP3P12645 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
BMP3P12645 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP3P12645 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP3P12645 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.29■□□□□ 0.52
BMP3P12645 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BMP3P12645 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 AC124067.4-201ENST00000519691 2379 ntBASIC18.29■□□□□ 0.52
BMP3P12645 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
BMP3P12645 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.29■□□□□ 0.52
BMP3P12645 ARSEP1-201ENST00000420443 635 ntBASIC18.29■□□□□ 0.52
BMP3P12645 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.29■□□□□ 0.52
BMP3P12645 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BMP3P12645 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP3P12645 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms