Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AL512384.1-201ENST00000406683 331 ntBASIC12.5□□□□□ -0.41
CD28P10747 U91328.1-201ENST00000437528 223 ntBASIC12.5□□□□□ -0.41
CD28P10747 ATP5G2P4-201ENST00000442175 420 ntBASIC12.5□□□□□ -0.41
CD28P10747 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.5□□□□□ -0.41
CD28P10747 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 TIMM17BP1-201ENST00000545713 516 ntBASIC12.5□□□□□ -0.41
CD28P10747 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 AC123567.1-201ENST00000548294 1261 ntBASIC12.5□□□□□ -0.41
CD28P10747 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.5□□□□□ -0.41
CD28P10747 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AL359881.2-201ENST00000602973 570 ntBASIC12.5□□□□□ -0.41
CD28P10747 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
CD28P10747 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CD28P10747 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD28P10747 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CD28P10747 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.49□□□□□ -0.41
CD28P10747 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 MEP1AP4-201ENST00000423244 1087 ntBASIC12.49□□□□□ -0.41
CD28P10747 AC007274.1-201ENST00000439805 662 ntBASIC12.49□□□□□ -0.41
CD28P10747 GPR53P-205ENST00000457298 1084 ntBASIC12.49□□□□□ -0.41
CD28P10747 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.49□□□□□ -0.41
CD28P10747 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.49□□□□□ -0.41
CD28P10747 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 AC074044.1-201ENST00000609673 707 ntBASIC12.49□□□□□ -0.41
CD28P10747 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms