Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 FAM220BP-201ENST00000377689 816 ntBASIC17.04■□□□□ 0.32
FAM228BP0C875 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.04■□□□□ 0.32
FAM228BP0C875 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
FAM228BP0C875 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.04■□□□□ 0.32
FAM228BP0C875 RNA5SP410-201ENST00000516285 106 ntBASIC17.04■□□□□ 0.32
FAM228BP0C875 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.04■□□□□ 0.32
FAM228BP0C875 AC120114.3-201ENST00000611923 658 ntBASIC17.04■□□□□ 0.32
FAM228BP0C875 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.04■□□□□ 0.32
FAM228BP0C875 AC127383.1-201ENST00000444697 1800 ntBASIC17.04■□□□□ 0.32
FAM228BP0C875 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM228BP0C875 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FAM228BP0C875 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 MIR346-201ENST00000362234 95 ntBASIC17.03■□□□□ 0.32
FAM228BP0C875 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FAM228BP0C875 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.03■□□□□ 0.32
FAM228BP0C875 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 AC023274.1-201ENST00000418278 595 ntBASIC17.03■□□□□ 0.32
FAM228BP0C875 FAM58CP-201ENST00000435741 640 ntBASIC17.03■□□□□ 0.32
FAM228BP0C875 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 LINC01225-203ENST00000563550 1244 ntBASIC17.03■□□□□ 0.32
FAM228BP0C875 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.03■□□□□ 0.32
FAM228BP0C875 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.03■□□□□ 0.32
FAM228BP0C875 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.03■□□□□ 0.32
FAM228BP0C875 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FAM228BP0C875 TCAF2P1-201ENST00000291129 2421 ntBASIC17.03■□□□□ 0.32
FAM228BP0C875 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FAM228BP0C875 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FAM228BP0C875 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM228BP0C875 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM228BP0C875 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM228BP0C875 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.02■□□□□ 0.32
FAM228BP0C875 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
FAM228BP0C875 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.02■□□□□ 0.32
FAM228BP0C875 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FAM228BP0C875 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FAM228BP0C875 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.02■□□□□ 0.32
FAM228BP0C875 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FAM228BP0C875 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.02■□□□□ 0.32
FAM228BP0C875 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.02■□□□□ 0.32
FAM228BP0C875 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 AP000842.3-202ENST00000569238 1080 ntBASIC17.02■□□□□ 0.32
FAM228BP0C875 AL121894.2-201ENST00000602977 491 ntBASIC17.02■□□□□ 0.32
FAM228BP0C875 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.02■□□□□ 0.32
FAM228BP0C875 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FAM228BP0C875 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.02■□□□□ 0.32
FAM228BP0C875 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.02■□□□□ 0.31
FAM228BP0C875 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FAM228BP0C875 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FAM228BP0C875 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
FAM228BP0C875 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms