Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
RETP07949 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.09■□□□□ 0.17
RETP07949 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RETP07949 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RETP07949 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 GOLGA2P4-201ENST00000441462 777 ntBASIC16.09■□□□□ 0.17
RETP07949 CSF2RBP1-201ENST00000447905 391 ntBASIC16.09■□□□□ 0.17
RETP07949 FO681548.1-201ENST00000455617 1132 ntBASIC16.09■□□□□ 0.17
RETP07949 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.09■□□□□ 0.17
RETP07949 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RETP07949 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.09■□□□□ 0.17
RETP07949 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RETP07949 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.09■□□□□ 0.17
RETP07949 AL022328.1-201ENST00000610050 478 ntBASIC16.09■□□□□ 0.17
RETP07949 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.09■□□□□ 0.17
RETP07949 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RETP07949 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.09■□□□□ 0.17
RETP07949 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.09■□□□□ 0.17
RETP07949 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RETP07949 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.08■□□□□ 0.17
RETP07949 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RETP07949 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RETP07949 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RETP07949 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RETP07949 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.08■□□□□ 0.17
RETP07949 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RETP07949 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.08■□□□□ 0.16
RETP07949 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.08■□□□□ 0.16
RETP07949 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.08■□□□□ 0.16
RETP07949 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RETP07949 TUBB8P12-201ENST00000308911 1335 ntBASIC16.08■□□□□ 0.16
RETP07949 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 TUBB7P-202ENST00000428444 1305 ntBASIC16.08■□□□□ 0.16
RETP07949 TUBB8P7-204ENST00000567960 1332 ntBASIC16.08■□□□□ 0.16
RETP07949 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.08■□□□□ 0.16
RETP07949 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.08■□□□□ 0.16
RETP07949 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.08■□□□□ 0.16
RETP07949 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RETP07949 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.08■□□□□ 0.16
RETP07949 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RETP07949 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.08■□□□□ 0.16
RETP07949 AL662844.4-201ENST00000606367 2838 ntBASIC16.08■□□□□ 0.16
RETP07949 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RETP07949 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.07■□□□□ 0.16
RETP07949 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RETP07949 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.07■□□□□ 0.16
RETP07949 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.07■□□□□ 0.16
RETP07949 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RETP07949 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms