Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.8■□□□□ 0.12
CAPN1P07384 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 AC015911.4-201ENST00000588022 1070 ntBASIC15.8■□□□□ 0.12
CAPN1P07384 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 AC084121.4-201ENST00000641598 221 ntBASIC15.8■□□□□ 0.12
CAPN1P07384 AF228730.8-201ENST00000642140 221 ntBASIC15.8■□□□□ 0.12
CAPN1P07384 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.79■□□□□ 0.12
CAPN1P07384 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN1P07384 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN1P07384 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN1P07384 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN1P07384 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 KRT18P34-201ENST00000488218 1270 ntBASIC15.79■□□□□ 0.12
CAPN1P07384 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 AL512356.2-201ENST00000546955 174 ntBASIC15.79■□□□□ 0.12
CAPN1P07384 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN1P07384 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN1P07384 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN1P07384 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN1P07384 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN1P07384 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.78■□□□□ 0.12
CAPN1P07384 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN1P07384 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN1P07384 Z92544.3-201ENST00000624747 417 ntBASIC15.78■□□□□ 0.12
CAPN1P07384 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 AC016027.1-202ENST00000607927 1699 ntBASIC15.78■□□□□ 0.12
CAPN1P07384 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CAPN1P07384 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 AC008677.1-201ENST00000519230 1561 ntBASIC15.78■□□□□ 0.12
CAPN1P07384 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms