Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.46□□□□□ -0.25
CD74P04233 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 AC023024.2-201ENST00000623561 1993 ntBASIC13.46□□□□□ -0.25
CD74P04233 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD74P04233 DUSP5P1-201ENST00000441325 1139 ntBASIC13.46□□□□□ -0.25
CD74P04233 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.46□□□□□ -0.25
CD74P04233 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.46□□□□□ -0.25
CD74P04233 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 AL355877.3-201ENST00000622820 899 ntBASIC13.46□□□□□ -0.25
CD74P04233 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.46□□□□□ -0.25
CD74P04233 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
CD74P04233 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD74P04233 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CD74P04233 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD74P04233 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CD74P04233 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD74P04233 AL137784.3-201ENST00000623858 2288 ntBASIC13.46□□□□□ -0.26
CD74P04233 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.46□□□□□ -0.26
CD74P04233 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD74P04233 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD74P04233 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CD74P04233 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 HMGA1P7-201ENST00000406908 502 ntBASIC13.45□□□□□ -0.26
CD74P04233 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 LAGE3P1-201ENST00000425356 484 ntBASIC13.45□□□□□ -0.26
CD74P04233 AL645939.2-201ENST00000427340 991 ntBASIC13.45□□□□□ -0.26
CD74P04233 GPX1P2-201ENST00000429271 606 ntBASIC13.45□□□□□ -0.26
CD74P04233 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.45□□□□□ -0.26
CD74P04233 MIR4313-201ENST00000580760 101 ntBASIC13.45□□□□□ -0.26
CD74P04233 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD74P04233 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD74P04233 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD74P04233 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD74P04233 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms