Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.53■□□□□ 0.08
LDLRP01130 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 AC025580.3-201ENST00000617932 1424 ntBASIC15.53■□□□□ 0.08
LDLRP01130 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LDLRP01130 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LDLRP01130 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.53■□□□□ 0.08
LDLRP01130 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.53■□□□□ 0.08
LDLRP01130 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.53■□□□□ 0.08
LDLRP01130 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.53■□□□□ 0.08
LDLRP01130 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.53■□□□□ 0.08
LDLRP01130 AL805961.1-202ENST00000641562 540 ntBASIC15.53■□□□□ 0.08
LDLRP01130 AC092902.6-201ENST00000641783 218 ntBASIC15.53■□□□□ 0.08
LDLRP01130 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 AC069224.1-201ENST00000566372 1715 ntBASIC15.53■□□□□ 0.08
LDLRP01130 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.53■□□□□ 0.08
LDLRP01130 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.53■□□□□ 0.08
LDLRP01130 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDLRP01130 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.52■□□□□ 0.08
LDLRP01130 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.52■□□□□ 0.08
LDLRP01130 LINC01144-201ENST00000626198 1710 ntBASIC15.52■□□□□ 0.08
LDLRP01130 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.52■□□□□ 0.08
LDLRP01130 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LDLRP01130 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LDLRP01130 PMS2P4-201ENST00000412466 1052 ntBASIC15.52■□□□□ 0.08
LDLRP01130 AC023141.5-201ENST00000458585 616 ntBASIC15.52■□□□□ 0.08
LDLRP01130 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.52■□□□□ 0.08
LDLRP01130 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LDLRP01130 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
LDLRP01130 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.52■□□□□ 0.08
LDLRP01130 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.52■□□□□ 0.08
LDLRP01130 LINC00628-201ENST00000628516 1289 ntBASIC15.52■□□□□ 0.08
LDLRP01130 FAM45BP-202ENST00000592932 1624 ntBASIC15.52■□□□□ 0.08
LDLRP01130 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.52■□□□□ 0.07
LDLRP01130 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LDLRP01130 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.52■□□□□ 0.07
LDLRP01130 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.52■□□□□ 0.07
LDLRP01130 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.52■□□□□ 0.07
LDLRP01130 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LDLRP01130 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LDLRP01130 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRP01130 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LDLRP01130 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRP01130 AC148477.5-201ENST00000625164 1645 ntBASIC15.51■□□□□ 0.07
LDLRP01130 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRP01130 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 PCGF3-213ENST00000620529 1899 ntBASIC15.51■□□□□ 0.07
LDLRP01130 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRP01130 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms