Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMP1P01033 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TIMP1P01033 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TIMP1P01033 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.01■□□□□ 0.31
TIMP1P01033 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TIMP1P01033 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 KLF2P2-201ENST00000416807 1039 ntBASIC17■□□□□ 0.31
TIMP1P01033 AC079178.1-201ENST00000420915 656 ntBASIC17■□□□□ 0.31
TIMP1P01033 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 NKAIN1P1-201ENST00000435754 582 ntBASIC17■□□□□ 0.31
TIMP1P01033 MAGEA5-201ENST00000446757 942 ntBASIC17■□□□□ 0.31
TIMP1P01033 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17■□□□□ 0.31
TIMP1P01033 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17■□□□□ 0.31
TIMP1P01033 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17■□□□□ 0.31
TIMP1P01033 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17■□□□□ 0.31
TIMP1P01033 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 MIR5572-201ENST00000583188 137 ntBASIC17■□□□□ 0.31
TIMP1P01033 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17■□□□□ 0.31
TIMP1P01033 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17■□□□□ 0.31
TIMP1P01033 AC007663.3-201ENST00000609632 465 ntBASIC17■□□□□ 0.31
TIMP1P01033 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17■□□□□ 0.31
TIMP1P01033 AC244157.2-201ENST00000616239 1006 ntBASIC17■□□□□ 0.31
TIMP1P01033 AP001505.2-201ENST00000616815 443 ntBASIC17■□□□□ 0.31
TIMP1P01033 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17■□□□□ 0.31
TIMP1P01033 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TIMP1P01033 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TIMP1P01033 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TIMP1P01033 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 AC138932.1-201ENST00000534164 6830 ntBASIC17■□□□□ 0.31
TIMP1P01033 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 UBALD1-205ENST00000590891 2641 ntBASIC17■□□□□ 0.31
TIMP1P01033 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMP1P01033 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 AC078925.2-201ENST00000624013 1973 ntBASIC16.99■□□□□ 0.31
TIMP1P01033 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
TIMP1P01033 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TIMP1P01033 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 AC104457.1-201ENST00000401024 814 ntBASIC16.99■□□□□ 0.31
TIMP1P01033 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.99■□□□□ 0.31
TIMP1P01033 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.99■□□□□ 0.31
TIMP1P01033 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 AC044849.1-201ENST00000519737 1188 ntBASIC16.99■□□□□ 0.31
TIMP1P01033 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
TIMP1P01033 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIMP1P01033 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMP1P01033 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TIMP1P01033 AC139713.2-201ENST00000641328 2723 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms