Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.94■□□□□ 0.14
PHGDHO43175 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.93■□□□□ 0.14
PHGDHO43175 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.93■□□□□ 0.14
PHGDHO43175 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 AC098859.1-201ENST00000502915 1238 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 AC027601.4-201ENST00000611259 610 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 SPTSSB-204ENST00000617024 1292 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 BX640515.1-201ENST00000617215 977 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 AC091812.2-201ENST00000619081 385 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 TMBIM7P-203ENST00000641617 1718 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PHGDHO43175 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.93■□□□□ 0.14
PHGDHO43175 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.93■□□□□ 0.14
PHGDHO43175 AC087481.3-201ENST00000602886 1894 ntBASIC15.93■□□□□ 0.14
PHGDHO43175 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PHGDHO43175 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 TNRC18P2-201ENST00000417666 2714 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 AC009090.5-201ENST00000624886 2285 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PHGDHO43175 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.92■□□□□ 0.14
PHGDHO43175 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.92■□□□□ 0.14
PHGDHO43175 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PHGDHO43175 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 AL355306.1-201ENST00000415580 579 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AC023274.1-201ENST00000418278 595 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.92■□□□□ 0.14
PHGDHO43175 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 AC105233.2-201ENST00000523697 349 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AF228730.5-201ENST00000530288 346 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AL135744.1-201ENST00000565098 629 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AC106730.1-201ENST00000566722 1090 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AC061975.2-201ENST00000581722 295 ntBASIC15.92■□□□□ 0.14
PHGDHO43175 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms