Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLOCKO15516 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLOCKO15516 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.28■□□□□ 0.04
CLOCKO15516 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
CLOCKO15516 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLOCKO15516 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
CLOCKO15516 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLOCKO15516 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLOCKO15516 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.27■□□□□ 0.04
CLOCKO15516 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLOCKO15516 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CLOCKO15516 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.27■□□□□ 0.04
CLOCKO15516 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.27■□□□□ 0.04
CLOCKO15516 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.27■□□□□ 0.04
CLOCKO15516 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.27■□□□□ 0.04
CLOCKO15516 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 AL671883.3-201ENST00000603274 991 ntBASIC15.27■□□□□ 0.04
CLOCKO15516 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 AC025062.2-201ENST00000605477 670 ntBASIC15.27■□□□□ 0.04
CLOCKO15516 GPALPP1-207ENST00000611650 899 ntBASIC15.27■□□□□ 0.04
CLOCKO15516 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.27■□□□□ 0.04
CLOCKO15516 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLOCKO15516 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLOCKO15516 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
CLOCKO15516 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.27■□□□□ 0.03
CLOCKO15516 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLOCKO15516 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CLOCKO15516 AC008677.1-201ENST00000519230 1561 ntBASIC15.27■□□□□ 0.03
CLOCKO15516 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLOCKO15516 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLOCKO15516 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CLOCKO15516 AC087481.3-201ENST00000602886 1894 ntBASIC15.27■□□□□ 0.03
CLOCKO15516 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.27■□□□□ 0.03
CLOCKO15516 AC005089.1-201ENST00000619486 2241 ntBASIC15.27■□□□□ 0.03
CLOCKO15516 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLOCKO15516 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.27■□□□□ 0.03
CLOCKO15516 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.26■□□□□ 0.03
CLOCKO15516 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CLOCKO15516 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLOCKO15516 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.26■□□□□ 0.03
CLOCKO15516 AC087163.2-201ENST00000457299 853 ntBASIC15.26■□□□□ 0.03
CLOCKO15516 AC106730.1-201ENST00000566722 1090 ntBASIC15.26■□□□□ 0.03
CLOCKO15516 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.26■□□□□ 0.03
CLOCKO15516 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 AL139424.1-201ENST00000607572 797 ntBASIC15.26■□□□□ 0.03
CLOCKO15516 AL589182.2-201ENST00000619332 1049 ntBASIC15.26■□□□□ 0.03
CLOCKO15516 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
CLOCKO15516 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.26■□□□□ 0.03
CLOCKO15516 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.26■□□□□ 0.03
CLOCKO15516 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms