Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PDIA3P2-201ENST00000428073 158 ntBASIC16.39■□□□□ 0.21
TRANK1O15050 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRANK1O15050 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.39■□□□□ 0.21
TRANK1O15050 AC125604.1-201ENST00000496255 707 ntBASIC16.39■□□□□ 0.21
TRANK1O15050 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.39■□□□□ 0.21
TRANK1O15050 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.39■□□□□ 0.21
TRANK1O15050 AL450472.2-201ENST00000603663 1156 ntBASIC16.39■□□□□ 0.21
TRANK1O15050 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
TRANK1O15050 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRANK1O15050 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 BX539320.1-201ENST00000623759 877 ntBASIC16.38■□□□□ 0.21
TRANK1O15050 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.38■□□□□ 0.21
TRANK1O15050 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.38■□□□□ 0.21
TRANK1O15050 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
TRANK1O15050 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
TRANK1O15050 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRANK1O15050 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.38■□□□□ 0.21
TRANK1O15050 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.38■□□□□ 0.21
TRANK1O15050 AC091544.8-201ENST00000619490 361 ntBASIC16.38■□□□□ 0.21
TRANK1O15050 ENPP7P14-201ENST00000621765 1040 ntBASIC16.38■□□□□ 0.21
TRANK1O15050 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRANK1O15050 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRANK1O15050 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 MIR3147-201ENST00000577811 66 ntBASIC16.37■□□□□ 0.21
TRANK1O15050 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.37■□□□□ 0.21
TRANK1O15050 ZACNP1-201ENST00000612259 710 ntBASIC16.37■□□□□ 0.21
TRANK1O15050 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 TPM3P8-201ENST00000330554 643 ntBASIC16.37■□□□□ 0.21
TRANK1O15050 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRANK1O15050 AC026316.1-201ENST00000398900 414 ntBASIC16.37■□□□□ 0.21
TRANK1O15050 IGLV3-15-201ENST00000518356 244 ntBASIC16.37■□□□□ 0.21
TRANK1O15050 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRANK1O15050 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.37■□□□□ 0.21
TRANK1O15050 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.37■□□□□ 0.21
TRANK1O15050 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRANK1O15050 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.36■□□□□ 0.21
TRANK1O15050 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.36■□□□□ 0.21
TRANK1O15050 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRANK1O15050 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRANK1O15050 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRANK1O15050 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRANK1O15050 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRANK1O15050 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.36■□□□□ 0.21
TRANK1O15050 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRANK1O15050 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.36■□□□□ 0.21
TRANK1O15050 MARK2P5-201ENST00000507649 634 ntBASIC16.36■□□□□ 0.21
TRANK1O15050 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.36■□□□□ 0.21
TRANK1O15050 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.36■□□□□ 0.21
TRANK1O15050 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.36■□□□□ 0.21
TRANK1O15050 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms