Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC004840.1-201ENST00000636359 365 ntBASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 MTHFR-217ENST00000641820 1569 ntBASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AC244107.1-201ENST00000442033 332 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SERBP1P3-201ENST00000459980 809 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AL512361.1-201ENST00000554200 418 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SPDYE22P-201ENST00000582158 798 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA2E9PIF3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 GNAQP1-201ENST00000444815 1067 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms