Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP001527.2-201ENST00000614441 631 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 KRT8P4-201ENST00000509735 1454 ntBASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 HIST2H2BB-201ENST00000449108 381 ntBASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 RNMTL1P1-201ENST00000454103 560 ntBASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 MARK2P5-201ENST00000507649 634 ntBASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 AC242376.1-201ENST00000559033 726 ntBASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM88BA6NKF7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM88BA6NKF7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC009053.2-201ENST00000563701 2365 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC020763.4-201ENST00000623414 4170 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC104073.2-201ENST00000453737 312 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC073413.1-201ENST00000603927 732 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AC097359.3-201ENST00000603982 1210 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 AL136301.1-201ENST00000615830 422 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 HLA-A-202ENST00000376806 1854 ntBASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88BA6NKF7 CROCCP2-202ENST00000412962 2773 ntBASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms