Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 AC105250.1-201ENST00000509378 2057 ntBASIC23.26■■□□□ 1.31
HFM1A2PYH4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 IGHV3-71-201ENST00000523324 359 ntBASIC23.25■■□□□ 1.31
HFM1A2PYH4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 AC015936.2-201ENST00000593177 259 ntBASIC23.25■■□□□ 1.31
HFM1A2PYH4 AC133539.2-201ENST00000604757 467 ntBASIC23.25■■□□□ 1.31
HFM1A2PYH4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HFM1A2PYH4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
HFM1A2PYH4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 HLA-DQB2-231ENST00000435145 2026 ntBASIC23.24■■□□□ 1.31
HFM1A2PYH4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 AL645728.2-202ENST00000641679 227 ntBASIC23.24■■□□□ 1.31
HFM1A2PYH4 AC092127.1-201ENST00000567093 3455 ntBASIC23.24■■□□□ 1.31
HFM1A2PYH4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HFM1A2PYH4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC23.24■■□□□ 1.31
HFM1A2PYH4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 DKFZP434H168-201ENST00000567381 1905 ntBASIC23.23■■□□□ 1.31
HFM1A2PYH4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 AC104457.1-201ENST00000401024 814 ntBASIC23.23■■□□□ 1.31
HFM1A2PYH4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HFM1A2PYH4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
HFM1A2PYH4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms