Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPCS1Q9Y6A9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SPCS1Q9Y6A9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.21■□□□□ 0.18
SPCS1Q9Y6A9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.21■□□□□ 0.18
SPCS1Q9Y6A9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPCS1Q9Y6A9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS1Q9Y6A9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 AL137060.1-201ENST00000618151 2648 ntBASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS1Q9Y6A9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 AP004609.3-201ENST00000610705 1884 ntBASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 AC127496.7-201ENST00000625110 1798 ntBASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SPCS1Q9Y6A9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS1Q9Y6A9 DUSP8P3-201ENST00000399571 1760 ntBASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 AC010864.1-201ENST00000609407 1511 ntBASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 AP002414.2-202ENST00000590929 1450 ntBASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS1Q9Y6A9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SPCS1Q9Y6A9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms