Protein–RNA interactions for Protein: Q9NZN8

CNOT2, CCR4-NOT transcription complex subunit 2, humanhuman

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2Q9NZN8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT2Q9NZN8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L13-201ENST00000554103 1267 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L15-201ENST00000611059 1267 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L23-201ENST00000615195 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L24-201ENST00000617576 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 LINC01971-201ENST00000617888 1048 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L22-201ENST00000618238 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L20-201ENST00000619712 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L21-201ENST00000622058 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L10-201ENST00000622460 1267 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 DUX4L25-201ENST00000624915 1269 ntBASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT2Q9NZN8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 AL162393.1-201ENST00000437852 946 ntBASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT2Q9NZN8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT2Q9NZN8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT2Q9NZN8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT2Q9NZN8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
CNOT2Q9NZN8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNOT2Q9NZN8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 HLA-L-211ENST00000482052 1765 ntBASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT2Q9NZN8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CNOT2Q9NZN8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21■□□□□ 0.95
CNOT2Q9NZN8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21■□□□□ 0.95
CNOT2Q9NZN8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21■□□□□ 0.95
CNOT2Q9NZN8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNOT2Q9NZN8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT2Q9NZN8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT2Q9NZN8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNOT2Q9NZN8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms