Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 AC068473.5-201ENST00000616428 2072 ntBASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF556Q9HAH1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF556Q9HAH1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF556Q9HAH1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF556Q9HAH1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF556Q9HAH1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ZNF556Q9HAH1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.58■■□□□ 1.05
ZNF556Q9HAH1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF556Q9HAH1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.58■■□□□ 1.04
ZNF556Q9HAH1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF556Q9HAH1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF556Q9HAH1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF556Q9HAH1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF556Q9HAH1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF556Q9HAH1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF556Q9HAH1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.56■■□□□ 1.04
ZNF556Q9HAH1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 AC004812.2-201ENST00000611079 2094 ntBASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZNF556Q9HAH1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF556Q9HAH1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 MIR6089-201ENST00000616698 64 ntBASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF556Q9HAH1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF556Q9HAH1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.52■■□□□ 1.03
ZNF556Q9HAH1 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms