Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDT1Q9H211 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDT1Q9H211 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDT1Q9H211 GUSBP5-201ENST00000418136 578 ntBASIC25.58■■□□□ 1.69
CDT1Q9H211 BX664725.1-201ENST00000438252 379 ntBASIC25.58■■□□□ 1.69
CDT1Q9H211 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDT1Q9H211 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CDT1Q9H211 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CDT1Q9H211 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.57■■□□□ 1.68
CDT1Q9H211 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CDT1Q9H211 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDT1Q9H211 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDT1Q9H211 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDT1Q9H211 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDT1Q9H211 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.55■■□□□ 1.68
CDT1Q9H211 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.55■■□□□ 1.68
CDT1Q9H211 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDT1Q9H211 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.55■■□□□ 1.68
CDT1Q9H211 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CDT1Q9H211 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDT1Q9H211 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDT1Q9H211 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.54■■□□□ 1.68
CDT1Q9H211 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDT1Q9H211 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDT1Q9H211 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDT1Q9H211 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDT1Q9H211 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CDT1Q9H211 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CDT1Q9H211 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.53■■□□□ 1.68
CDT1Q9H211 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDT1Q9H211 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDT1Q9H211 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.52■■□□□ 1.68
CDT1Q9H211 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.52■■□□□ 1.68
CDT1Q9H211 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.52■■□□□ 1.68
CDT1Q9H211 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.52■■□□□ 1.68
CDT1Q9H211 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.52■■□□□ 1.68
CDT1Q9H211 KRT125P-201ENST00000546827 989 ntBASIC25.52■■□□□ 1.68
CDT1Q9H211 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDT1Q9H211 AC021242.3-201ENST00000607598 1377 ntBASIC25.52■■□□□ 1.68
CDT1Q9H211 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDT1Q9H211 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDT1Q9H211 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CDT1Q9H211 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.51■■□□□ 1.67
CDT1Q9H211 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.51■■□□□ 1.67
CDT1Q9H211 MIR4787-201ENST00000607364 84 ntBASIC25.51■■□□□ 1.67
CDT1Q9H211 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDT1Q9H211 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.51■■□□□ 1.67
CDT1Q9H211 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.51■■□□□ 1.67
CDT1Q9H211 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDT1Q9H211 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.5■■□□□ 1.67
CDT1Q9H211 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.5■■□□□ 1.67
CDT1Q9H211 AF131216.4-201ENST00000638924 1588 ntBASIC25.5■■□□□ 1.67
CDT1Q9H211 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDT1Q9H211 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDT1Q9H211 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
CDT1Q9H211 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDT1Q9H211 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.49■■□□□ 1.67
CDT1Q9H211 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDT1Q9H211 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDT1Q9H211 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CDT1Q9H211 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDT1Q9H211 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CDT1Q9H211 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDT1Q9H211 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.48■■□□□ 1.67
CDT1Q9H211 MIR6089-201ENST00000616698 64 ntBASIC25.48■■□□□ 1.67
CDT1Q9H211 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDT1Q9H211 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDT1Q9H211 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDT1Q9H211 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDT1Q9H211 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDT1Q9H211 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.47■■□□□ 1.67
CDT1Q9H211 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.47■■□□□ 1.67
CDT1Q9H211 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.47■■□□□ 1.67
CDT1Q9H211 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.47■■□□□ 1.67
CDT1Q9H211 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDT1Q9H211 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDT1Q9H211 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.47■■□□□ 1.67
CDT1Q9H211 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDT1Q9H211 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.46■■□□□ 1.67
CDT1Q9H211 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDT1Q9H211 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDT1Q9H211 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
CDT1Q9H211 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
CDT1Q9H211 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDT1Q9H211 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDT1Q9H211 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
CDT1Q9H211 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms