Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHCQ99643 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHCQ99643 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDHCQ99643 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SDHCQ99643 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDHCQ99643 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.39■□□□□ 0.85
SDHCQ99643 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHCQ99643 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.39■□□□□ 0.85
SDHCQ99643 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.39■□□□□ 0.85
SDHCQ99643 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SDHCQ99643 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDHCQ99643 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHCQ99643 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHCQ99643 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.38■□□□□ 0.85
SDHCQ99643 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SDHCQ99643 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHCQ99643 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SDHCQ99643 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.37■□□□□ 0.85
SDHCQ99643 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.37■□□□□ 0.85
SDHCQ99643 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
SDHCQ99643 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHCQ99643 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDHCQ99643 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.37■□□□□ 0.85
SDHCQ99643 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHCQ99643 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHCQ99643 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.37■□□□□ 0.85
SDHCQ99643 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHCQ99643 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
SDHCQ99643 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDHCQ99643 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDHCQ99643 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
SDHCQ99643 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHCQ99643 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHCQ99643 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHCQ99643 AC127496.7-201ENST00000625110 1798 ntBASIC20.35■□□□□ 0.85
SDHCQ99643 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHCQ99643 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SDHCQ99643 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.35■□□□□ 0.85
SDHCQ99643 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SDHCQ99643 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
SDHCQ99643 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHCQ99643 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHCQ99643 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHCQ99643 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDHCQ99643 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.34■□□□□ 0.85
SDHCQ99643 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHCQ99643 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SDHCQ99643 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHCQ99643 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHCQ99643 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHCQ99643 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.33■□□□□ 0.85
SDHCQ99643 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDHCQ99643 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.33■□□□□ 0.85
SDHCQ99643 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SDHCQ99643 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SDHCQ99643 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.33■□□□□ 0.84
SDHCQ99643 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHCQ99643 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHCQ99643 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHCQ99643 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SDHCQ99643 CAHM-201ENST00000604200 896 ntBASIC20.32■□□□□ 0.84
SDHCQ99643 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.32■□□□□ 0.84
SDHCQ99643 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHCQ99643 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHCQ99643 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDHCQ99643 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDHCQ99643 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.31■□□□□ 0.84
SDHCQ99643 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHCQ99643 SETD8P1-201ENST00000623146 1180 ntBASIC20.31■□□□□ 0.84
SDHCQ99643 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHCQ99643 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SDHCQ99643 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SDHCQ99643 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHCQ99643 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SDHCQ99643 GUSBP5-202ENST00000510805 1989 ntBASIC20.3■□□□□ 0.84
SDHCQ99643 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.3■□□□□ 0.84
SDHCQ99643 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHCQ99643 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.3■□□□□ 0.84
SDHCQ99643 MIR6090-201ENST00000622481 60 ntBASIC20.3■□□□□ 0.84
SDHCQ99643 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SDHCQ99643 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.3■□□□□ 0.84
SDHCQ99643 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHCQ99643 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHCQ99643 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHCQ99643 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHCQ99643 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHCQ99643 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHCQ99643 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHCQ99643 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SDHCQ99643 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.29■□□□□ 0.84
SDHCQ99643 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.29■□□□□ 0.84
SDHCQ99643 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SDHCQ99643 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms